Serveur d'exploration Covid

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Identification of SARS-COV spike protein-derived and HLA-A2-restricted human CTL epitopes by using a new muramyl dipeptidederivative adjuvant.

Identifieur interne : 001847 ( Main/Exploration ); précédent : 001846; suivant : 001848

Identification of SARS-COV spike protein-derived and HLA-A2-restricted human CTL epitopes by using a new muramyl dipeptidederivative adjuvant.

Auteurs : Y-Z Chen [Japon] ; G. Liu ; S. Senju ; Q. Wang ; A. Irie ; M. Haruta ; M. Matsui ; F. Yasui ; M. Kohara ; Y. Nishimura

Source :

RBID : pubmed:20378004

Descripteurs français

English descriptors

Abstract

Severe acute respiratory syndrome (SARS) spread during the winter of 2003, and attempts have been made to develop vaccines against SARS corona virus (SARS-CoV). The present study provides a strategy to rapidly identify SARS-CoV-derived antigenic peptides recognized by HLA-A2-restricted cytotoxic T lymphocytes (CTLs). Forty-three candidate peptides having HLA-A2-binding motifs were selected in silico and HLA-A2/Db chimeric MHC class I-transgenic mice were immunized with these peptides and a new derivative of muramyl dipeptide that can induce upregulation of HLA-DR, CD80, CD86, and CD40 in human CD14+ antigen presenting cells, was administered as an adjuvant. Six HLAA2-restricted mouse CTL epitopes were identified, including two new epitopes which have never been reported before. One of the novel peptides was naturally processed and successfully induced HLAA2-restricted specific CTLs in both HLA transgenic mice and healthy donors. The method was useful, convenient and efficient for rapid identification of CTL epitopes derived from SARS-CoV proteins and will be possibly applicable for other pathogens to develop a peptide-based vaccine.

DOI: 10.1177/039463201002300115
PubMed: 20378004


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Identification of SARS-COV spike protein-derived and HLA-A2-restricted human CTL epitopes by using a new muramyl dipeptidederivative adjuvant.</title>
<author>
<name sortKey="Chen, Y Z" sort="Chen, Y Z" uniqKey="Chen Y" first="Y-Z" last="Chen">Y-Z Chen</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Immunogenetics, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>Department of Immunogenetics, Graduate School of Medical Sciences, Kumamoto University, Kumamoto</wicri:regionArea>
<wicri:noRegion>Kumamoto</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Liu, G" sort="Liu, G" uniqKey="Liu G" first="G" last="Liu">G. Liu</name>
</author>
<author>
<name sortKey="Senju, S" sort="Senju, S" uniqKey="Senju S" first="S" last="Senju">S. Senju</name>
</author>
<author>
<name sortKey="Wang, Q" sort="Wang, Q" uniqKey="Wang Q" first="Q" last="Wang">Q. Wang</name>
</author>
<author>
<name sortKey="Irie, A" sort="Irie, A" uniqKey="Irie A" first="A" last="Irie">A. Irie</name>
</author>
<author>
<name sortKey="Haruta, M" sort="Haruta, M" uniqKey="Haruta M" first="M" last="Haruta">M. Haruta</name>
</author>
<author>
<name sortKey="Matsui, M" sort="Matsui, M" uniqKey="Matsui M" first="M" last="Matsui">M. Matsui</name>
</author>
<author>
<name sortKey="Yasui, F" sort="Yasui, F" uniqKey="Yasui F" first="F" last="Yasui">F. Yasui</name>
</author>
<author>
<name sortKey="Kohara, M" sort="Kohara, M" uniqKey="Kohara M" first="M" last="Kohara">M. Kohara</name>
</author>
<author>
<name sortKey="Nishimura, Y" sort="Nishimura, Y" uniqKey="Nishimura Y" first="Y" last="Nishimura">Y. Nishimura</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="????">
<PubDate>
<MedlineDate>2010 Jan-Mar</MedlineDate>
</PubDate>
</date>
<idno type="RBID">pubmed:20378004</idno>
<idno type="pmid">20378004</idno>
<idno type="doi">10.1177/039463201002300115</idno>
<idno type="wicri:Area/PubMed/Corpus">000679</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000679</idno>
<idno type="wicri:Area/PubMed/Curation">000679</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000679</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000763</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000763</idno>
<idno type="wicri:Area/Ncbi/Merge">000169</idno>
<idno type="wicri:Area/Ncbi/Curation">000169</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000169</idno>
<idno type="wicri:doubleKey">0394-6320::Chen Y:identification:of:sars</idno>
<idno type="wicri:Area/Main/Merge">001882</idno>
<idno type="wicri:Area/Main/Curation">001847</idno>
<idno type="wicri:Area/Main/Exploration">001847</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Identification of SARS-COV spike protein-derived and HLA-A2-restricted human CTL epitopes by using a new muramyl dipeptidederivative adjuvant.</title>
<author>
<name sortKey="Chen, Y Z" sort="Chen, Y Z" uniqKey="Chen Y" first="Y-Z" last="Chen">Y-Z Chen</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Immunogenetics, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>Department of Immunogenetics, Graduate School of Medical Sciences, Kumamoto University, Kumamoto</wicri:regionArea>
<wicri:noRegion>Kumamoto</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Liu, G" sort="Liu, G" uniqKey="Liu G" first="G" last="Liu">G. Liu</name>
</author>
<author>
<name sortKey="Senju, S" sort="Senju, S" uniqKey="Senju S" first="S" last="Senju">S. Senju</name>
</author>
<author>
<name sortKey="Wang, Q" sort="Wang, Q" uniqKey="Wang Q" first="Q" last="Wang">Q. Wang</name>
</author>
<author>
<name sortKey="Irie, A" sort="Irie, A" uniqKey="Irie A" first="A" last="Irie">A. Irie</name>
</author>
<author>
<name sortKey="Haruta, M" sort="Haruta, M" uniqKey="Haruta M" first="M" last="Haruta">M. Haruta</name>
</author>
<author>
<name sortKey="Matsui, M" sort="Matsui, M" uniqKey="Matsui M" first="M" last="Matsui">M. Matsui</name>
</author>
<author>
<name sortKey="Yasui, F" sort="Yasui, F" uniqKey="Yasui F" first="F" last="Yasui">F. Yasui</name>
</author>
<author>
<name sortKey="Kohara, M" sort="Kohara, M" uniqKey="Kohara M" first="M" last="Kohara">M. Kohara</name>
</author>
<author>
<name sortKey="Nishimura, Y" sort="Nishimura, Y" uniqKey="Nishimura Y" first="Y" last="Nishimura">Y. Nishimura</name>
</author>
</analytic>
<series>
<title level="j">International journal of immunopathology and pharmacology</title>
<idno type="ISSN">0394-6320</idno>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Acetylmuramyl-Alanyl-Isoglutamine (analogs & derivatives)</term>
<term>Adjuvants, Immunologic (pharmacology)</term>
<term>Animals</term>
<term>Antigen Presentation</term>
<term>Antigens, Viral (immunology)</term>
<term>Epitopes, T-Lymphocyte</term>
<term>HLA-A2 Antigen (immunology)</term>
<term>Humans</term>
<term>Immunization</term>
<term>Membrane Glycoproteins (immunology)</term>
<term>Mice</term>
<term>Mice, Inbred C57BL</term>
<term>Mice, Transgenic</term>
<term>Spike Glycoprotein, Coronavirus</term>
<term>T-Lymphocytes, Cytotoxic (immunology)</term>
<term>Viral Envelope Proteins (immunology)</term>
<term>Viral Vaccines (immunology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Acétylmuramyl alanyl isoglutamine (analogues et dérivés)</term>
<term>Adjuvants immunologiques (pharmacologie)</term>
<term>Animaux</term>
<term>Antigène HLA-A2 (immunologie)</term>
<term>Antigènes viraux (immunologie)</term>
<term>Déterminants antigéniques des lymphocytes T</term>
<term>Glycoprotéine de spicule des coronavirus</term>
<term>Glycoprotéines membranaires (immunologie)</term>
<term>Humains</term>
<term>Immunisation</term>
<term>Lymphocytes T cytotoxiques (immunologie)</term>
<term>Protéines de l'enveloppe virale (immunologie)</term>
<term>Présentation d'antigène</term>
<term>Souris</term>
<term>Souris de lignée C57BL</term>
<term>Souris transgéniques</term>
<term>Vaccins antiviraux (immunologie)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="analogs & derivatives" xml:lang="en">
<term>Acetylmuramyl-Alanyl-Isoglutamine</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="immunology" xml:lang="en">
<term>Antigens, Viral</term>
<term>HLA-A2 Antigen</term>
<term>Membrane Glycoproteins</term>
<term>Viral Envelope Proteins</term>
<term>Viral Vaccines</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="pharmacology" xml:lang="en">
<term>Adjuvants, Immunologic</term>
</keywords>
<keywords scheme="MESH" qualifier="analogues et dérivés" xml:lang="fr">
<term>Acétylmuramyl alanyl isoglutamine</term>
</keywords>
<keywords scheme="MESH" qualifier="immunologie" xml:lang="fr">
<term>Antigène HLA-A2</term>
<term>Antigènes viraux</term>
<term>Glycoprotéines membranaires</term>
<term>Lymphocytes T cytotoxiques</term>
<term>Protéines de l'enveloppe virale</term>
<term>Vaccins antiviraux</term>
</keywords>
<keywords scheme="MESH" qualifier="immunology" xml:lang="en">
<term>T-Lymphocytes, Cytotoxic</term>
</keywords>
<keywords scheme="MESH" qualifier="pharmacologie" xml:lang="fr">
<term>Adjuvants immunologiques</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Animals</term>
<term>Antigen Presentation</term>
<term>Epitopes, T-Lymphocyte</term>
<term>Humans</term>
<term>Immunization</term>
<term>Mice</term>
<term>Mice, Inbred C57BL</term>
<term>Mice, Transgenic</term>
<term>Spike Glycoprotein, Coronavirus</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Animaux</term>
<term>Déterminants antigéniques des lymphocytes T</term>
<term>Glycoprotéine de spicule des coronavirus</term>
<term>Humains</term>
<term>Immunisation</term>
<term>Présentation d'antigène</term>
<term>Souris</term>
<term>Souris de lignée C57BL</term>
<term>Souris transgéniques</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Severe acute respiratory syndrome (SARS) spread during the winter of 2003, and attempts have been made to develop vaccines against SARS corona virus (SARS-CoV). The present study provides a strategy to rapidly identify SARS-CoV-derived antigenic peptides recognized by HLA-A2-restricted cytotoxic T lymphocytes (CTLs). Forty-three candidate peptides having HLA-A2-binding motifs were selected in silico and HLA-A2/Db chimeric MHC class I-transgenic mice were immunized with these peptides and a new derivative of muramyl dipeptide that can induce upregulation of HLA-DR, CD80, CD86, and CD40 in human CD14+ antigen presenting cells, was administered as an adjuvant. Six HLAA2-restricted mouse CTL epitopes were identified, including two new epitopes which have never been reported before. One of the novel peptides was naturally processed and successfully induced HLAA2-restricted specific CTLs in both HLA transgenic mice and healthy donors. The method was useful, convenient and efficient for rapid identification of CTL epitopes derived from SARS-CoV proteins and will be possibly applicable for other pathogens to develop a peptide-based vaccine.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Japon</li>
</country>
</list>
<tree>
<noCountry>
<name sortKey="Haruta, M" sort="Haruta, M" uniqKey="Haruta M" first="M" last="Haruta">M. Haruta</name>
<name sortKey="Irie, A" sort="Irie, A" uniqKey="Irie A" first="A" last="Irie">A. Irie</name>
<name sortKey="Kohara, M" sort="Kohara, M" uniqKey="Kohara M" first="M" last="Kohara">M. Kohara</name>
<name sortKey="Liu, G" sort="Liu, G" uniqKey="Liu G" first="G" last="Liu">G. Liu</name>
<name sortKey="Matsui, M" sort="Matsui, M" uniqKey="Matsui M" first="M" last="Matsui">M. Matsui</name>
<name sortKey="Nishimura, Y" sort="Nishimura, Y" uniqKey="Nishimura Y" first="Y" last="Nishimura">Y. Nishimura</name>
<name sortKey="Senju, S" sort="Senju, S" uniqKey="Senju S" first="S" last="Senju">S. Senju</name>
<name sortKey="Wang, Q" sort="Wang, Q" uniqKey="Wang Q" first="Q" last="Wang">Q. Wang</name>
<name sortKey="Yasui, F" sort="Yasui, F" uniqKey="Yasui F" first="F" last="Yasui">F. Yasui</name>
</noCountry>
<country name="Japon">
<noRegion>
<name sortKey="Chen, Y Z" sort="Chen, Y Z" uniqKey="Chen Y" first="Y-Z" last="Chen">Y-Z Chen</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/CovidV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001847 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001847 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Sante
   |area=    CovidV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:20378004
   |texte=   Identification of SARS-COV spike protein-derived and HLA-A2-restricted human CTL epitopes by using a new muramyl dipeptidederivative adjuvant.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:20378004" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a CovidV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Fri Mar 27 18:14:15 2020. Site generation: Sun Jan 31 15:15:08 2021